Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX1P83916 AC009102.3-201ENST00000623118 1491 ntBASIC17.96■□□□□ 0.47
CBX1P83916 AC009949.1-201ENST00000623048 1830 ntBASIC17.96■□□□□ 0.47
CBX1P83916 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CBX1P83916 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX1P83916 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX1P83916 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX1P83916 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX1P83916 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX1P83916 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX1P83916 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX1P83916 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX1P83916 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
CBX1P83916 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CBX1P83916 PRAL-201ENST00000624952 3286 ntBASIC17.96■□□□□ 0.46
CBX1P83916 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX1P83916 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.95■□□□□ 0.46
CBX1P83916 RPS2P52-201ENST00000469610 820 ntBASIC17.95■□□□□ 0.46
CBX1P83916 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX1P83916 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.95■□□□□ 0.46
CBX1P83916 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CBX1P83916 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX1P83916 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CBX1P83916 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CBX1P83916 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX1P83916 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 LINC00528-201ENST00000600723 2160 ntBASIC17.94■□□□□ 0.46
CBX1P83916 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 AP003680.1-201ENST00000598970 3660 ntBASIC17.94■□□□□ 0.46
CBX1P83916 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 GPX1P1-201ENST00000388829 606 ntBASIC17.94■□□□□ 0.46
CBX1P83916 AL390719.1-204ENST00000412397 1219 ntBASIC17.94■□□□□ 0.46
CBX1P83916 POU5F1P3-201ENST00000428824 1078 ntBASIC17.94■□□□□ 0.46
CBX1P83916 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.94■□□□□ 0.46
CBX1P83916 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.94■□□□□ 0.46
CBX1P83916 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CBX1P83916 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.94■□□□□ 0.46
CBX1P83916 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CBX1P83916 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.94■□□□□ 0.46
CBX1P83916 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CBX1P83916 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CBX1P83916 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CBX1P83916 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CBX1P83916 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms