Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.9■□□□□ 0.46
IRX4P78413 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.9■□□□□ 0.46
IRX4P78413 AC112482.1-201ENST00000492080 688 ntBASIC17.9■□□□□ 0.46
IRX4P78413 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.9■□□□□ 0.46
IRX4P78413 AC009533.2-201ENST00000543664 586 ntBASIC17.9■□□□□ 0.46
IRX4P78413 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 HLA-J-201ENST00000462773 1622 ntBASIC17.9■□□□□ 0.46
IRX4P78413 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 INTS4P1-201ENST00000438455 1935 ntBASIC17.9■□□□□ 0.46
IRX4P78413 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 AP005117.1-201ENST00000584346 1413 ntBASIC17.89■□□□□ 0.46
IRX4P78413 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
IRX4P78413 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.89■□□□□ 0.46
IRX4P78413 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
IRX4P78413 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.89■□□□□ 0.46
IRX4P78413 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX4P78413 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
IRX4P78413 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
IRX4P78413 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 GPX1P2-201ENST00000429271 606 ntBASIC17.89■□□□□ 0.45
IRX4P78413 AL591424.1-201ENST00000442569 1213 ntBASIC17.89■□□□□ 0.45
IRX4P78413 KRT18P3-201ENST00000451602 1288 ntBASIC17.89■□□□□ 0.45
IRX4P78413 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 SART3-203ENST00000546611 1184 ntBASIC17.89■□□□□ 0.45
IRX4P78413 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.89■□□□□ 0.45
IRX4P78413 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX4P78413 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX4P78413 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.89■□□□□ 0.45
IRX4P78413 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
IRX4P78413 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.89■□□□□ 0.45
IRX4P78413 TNRC18P3-201ENST00000441896 2691 ntBASIC17.89■□□□□ 0.45
IRX4P78413 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
IRX4P78413 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX4P78413 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX4P78413 AP001094.4-201ENST00000579008 2176 ntBASIC17.89■□□□□ 0.45
IRX4P78413 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.88■□□□□ 0.45
IRX4P78413 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.88■□□□□ 0.45
IRX4P78413 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 AC113404.2-201ENST00000507884 177 ntBASIC17.88■□□□□ 0.45
IRX4P78413 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.88■□□□□ 0.45
IRX4P78413 AC012640.2-201ENST00000561606 901 ntBASIC17.88■□□□□ 0.45
IRX4P78413 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 MIR3687-2-201ENST00000577708 61 ntBASIC17.88■□□□□ 0.45
IRX4P78413 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 MIR3687-1-201ENST00000614492 61 ntBASIC17.88■□□□□ 0.45
IRX4P78413 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
IRX4P78413 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
IRX4P78413 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX4P78413 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX4P78413 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
IRX4P78413 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms