Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
CDH12P55289 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH12P55289 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH12P55289 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH12P55289 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CDH12P55289 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH12P55289 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CDH12P55289 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 AC007967.3-201ENST00000434308 558 ntBASIC16.03■□□□□ 0.16
CDH12P55289 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH12P55289 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.03■□□□□ 0.16
CDH12P55289 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH12P55289 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH12P55289 AL592071.1-201ENST00000611956 408 ntBASIC16.03■□□□□ 0.16
CDH12P55289 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH12P55289 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDH12P55289 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH12P55289 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
CDH12P55289 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH12P55289 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH12P55289 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH12P55289 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
CDH12P55289 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH12P55289 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH12P55289 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH12P55289 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDH12P55289 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 MYCLP1-201ENST00000372451 1075 ntBASIC16.02■□□□□ 0.16
CDH12P55289 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.02■□□□□ 0.16
CDH12P55289 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH12P55289 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.02■□□□□ 0.16
CDH12P55289 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDH12P55289 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH12P55289 AL136038.3-201ENST00000561909 1096 ntBASIC16.02■□□□□ 0.16
CDH12P55289 IGHV3-41-201ENST00000613121 348 ntBASIC16.02■□□□□ 0.16
CDH12P55289 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH12P55289 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH12P55289 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH12P55289 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
CDH12P55289 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CDH12P55289 AC046158.3-201ENST00000624947 2558 ntBASIC16.02■□□□□ 0.15
CDH12P55289 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH12P55289 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH12P55289 AC125634.1-201ENST00000438758 1403 ntBASIC16.02■□□□□ 0.15
CDH12P55289 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH12P55289 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH12P55289 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms