Protein–RNA interactions for Protein: P55210

CASP7, Caspase-7, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7P55210 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CASP7P55210 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CASP7P55210 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.06■□□□□ 0.96
CASP7P55210 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.06■□□□□ 0.96
CASP7P55210 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CASP7P55210 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.06■□□□□ 0.96
CASP7P55210 AC087641.1-201ENST00000557561 1021 ntBASIC21.06■□□□□ 0.96
CASP7P55210 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CASP7P55210 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CASP7P55210 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.06■□□□□ 0.96
CASP7P55210 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP7P55210 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP7P55210 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP7P55210 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
CASP7P55210 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.05■□□□□ 0.96
CASP7P55210 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CASP7P55210 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP7P55210 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 TFAMP1-201ENST00000412727 736 ntBASIC21.05■□□□□ 0.96
CASP7P55210 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP7P55210 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CASP7P55210 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.05■□□□□ 0.96
CASP7P55210 LINC01225-203ENST00000563550 1244 ntBASIC21.05■□□□□ 0.96
CASP7P55210 MIR3909-201ENST00000579518 119 ntBASIC21.05■□□□□ 0.96
CASP7P55210 AC004835.2-201ENST00000603762 682 ntBASIC21.05■□□□□ 0.96
CASP7P55210 AL031055.1-201ENST00000606362 631 ntBASIC21.05■□□□□ 0.96
CASP7P55210 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 AC092068.3-201ENST00000587894 2016 ntBASIC21.05■□□□□ 0.96
CASP7P55210 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP7P55210 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CASP7P55210 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CASP7P55210 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.04■□□□□ 0.96
CASP7P55210 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.04■□□□□ 0.96
CASP7P55210 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.04■□□□□ 0.96
CASP7P55210 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.04■□□□□ 0.96
CASP7P55210 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.04■□□□□ 0.96
CASP7P55210 AL135744.1-201ENST00000565098 629 ntBASIC21.04■□□□□ 0.96
CASP7P55210 RARRES2P8-201ENST00000566335 367 ntBASIC21.04■□□□□ 0.96
CASP7P55210 CYP2A7P1-201ENST00000595391 815 ntBASIC21.04■□□□□ 0.96
CASP7P55210 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.04■□□□□ 0.96
CASP7P55210 AL021920.2-201ENST00000624828 1351 ntBASIC21.04■□□□□ 0.96
CASP7P55210 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.04■□□□□ 0.96
CASP7P55210 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.04■□□□□ 0.96
CASP7P55210 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CASP7P55210 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CASP7P55210 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CASP7P55210 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP7P55210 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.04■□□□□ 0.96
CASP7P55210 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CASP7P55210 LINC00895-201ENST00000629028 1637 ntBASIC21.04■□□□□ 0.96
CASP7P55210 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CASP7P55210 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP7P55210 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CASP7P55210 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CASP7P55210 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CASP7P55210 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CASP7P55210 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP7P55210 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP7P55210 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP7P55210 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms