Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCS2P54868 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
HMGCS2P54868 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCS2P54868 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCS2P54868 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS2P54868 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS2P54868 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCS2P54868 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS2P54868 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCS2P54868 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMGCS2P54868 FO538757.1-201ENST00000623083 1397 ntBASIC19.68■□□□□ 0.74
HMGCS2P54868 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS2P54868 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCS2P54868 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS2P54868 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS2P54868 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
HMGCS2P54868 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCS2P54868 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCS2P54868 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 TREML5P-201ENST00000421694 576 ntBASIC19.67■□□□□ 0.74
HMGCS2P54868 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.67■□□□□ 0.74
HMGCS2P54868 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCS2P54868 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.67■□□□□ 0.74
HMGCS2P54868 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.67■□□□□ 0.74
HMGCS2P54868 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCS2P54868 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 SLC22A20-204ENST00000530038 1673 ntBASIC19.67■□□□□ 0.74
HMGCS2P54868 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HMGCS2P54868 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HMGCS2P54868 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS2P54868 WASH6P-202ENST00000359512 1437 ntBASIC19.67■□□□□ 0.74
HMGCS2P54868 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HMGCS2P54868 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HMGCS2P54868 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HMGCS2P54868 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.66■□□□□ 0.74
HMGCS2P54868 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.66■□□□□ 0.74
HMGCS2P54868 AC236430.1-201ENST00000402231 743 ntBASIC19.66■□□□□ 0.74
HMGCS2P54868 HCG4-201ENST00000418983 998 ntBASIC19.66■□□□□ 0.74
HMGCS2P54868 UGT1A2P-201ENST00000454886 866 ntBASIC19.66■□□□□ 0.74
HMGCS2P54868 SLC25A39P2-201ENST00000537614 270 ntBASIC19.66■□□□□ 0.74
HMGCS2P54868 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.66■□□□□ 0.74
HMGCS2P54868 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HMGCS2P54868 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCS2P54868 AC084121.4-201ENST00000641598 221 ntBASIC19.66■□□□□ 0.74
HMGCS2P54868 AF228730.8-201ENST00000642140 221 ntBASIC19.66■□□□□ 0.74
HMGCS2P54868 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMGCS2P54868 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCS2P54868 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.66■□□□□ 0.74
HMGCS2P54868 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.66■□□□□ 0.74
HMGCS2P54868 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HMGCS2P54868 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCS2P54868 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGCS2P54868 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 RNU1-129P-201ENST00000384064 167 ntBASIC19.65■□□□□ 0.74
HMGCS2P54868 MIR661-201ENST00000384842 89 ntBASIC19.65■□□□□ 0.74
HMGCS2P54868 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGCS2P54868 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCS2P54868 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms