Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF140P52738 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF140P52738 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF140P52738 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF140P52738 NKILA-202ENST00000614771 2598 ntBASIC17.05■□□□□ 0.32
ZNF140P52738 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF140P52738 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF140P52738 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF140P52738 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF140P52738 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF140P52738 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF140P52738 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 MRPL3P1-201ENST00000400109 1033 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 RPS15P9-201ENST00000494093 319 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 RNA5SP419-201ENST00000515908 135 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 AC105339.3-201ENST00000560043 636 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF140P52738 MIR7706-201ENST00000613747 67 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 AL773604.1-201ENST00000617417 272 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 PCDHB17P-201ENST00000539533 2393 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
ZNF140P52738 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 AP002414.3-201ENST00000589352 1468 ntBASIC17.04■□□□□ 0.32
ZNF140P52738 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF140P52738 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF140P52738 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
ZNF140P52738 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF140P52738 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF140P52738 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 TPM4P1-201ENST00000436100 807 ntBASIC17.03■□□□□ 0.32
ZNF140P52738 AC087163.2-201ENST00000457299 853 ntBASIC17.03■□□□□ 0.32
ZNF140P52738 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 SLC25A6P4-201ENST00000586535 553 ntBASIC17.03■□□□□ 0.32
ZNF140P52738 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.03■□□□□ 0.32
ZNF140P52738 AL356488.2-201ENST00000602755 427 ntBASIC17.03■□□□□ 0.32
ZNF140P52738 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ZNF140P52738 AF228730.7-201ENST00000641842 219 ntBASIC17.03■□□□□ 0.32
ZNF140P52738 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ZNF140P52738 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF140P52738 AC011676.5-201ENST00000624864 2660 ntBASIC17.03■□□□□ 0.32
ZNF140P52738 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 PI4KAP1-204ENST00000612579 1703 ntBASIC17.02■□□□□ 0.32
ZNF140P52738 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms