Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5CP51148 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB5CP51148 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5CP51148 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 SLC25A1P3-201ENST00000395415 828 ntBASIC13.84□□□□□ -0.19
RAB5CP51148 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.84□□□□□ -0.19
RAB5CP51148 AL355355.2-201ENST00000442321 338 ntBASIC13.84□□□□□ -0.19
RAB5CP51148 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB5CP51148 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB5CP51148 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5CP51148 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB5CP51148 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB5CP51148 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5CP51148 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RAB5CP51148 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5CP51148 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5CP51148 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5CP51148 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RAB5CP51148 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB5CP51148 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.83□□□□□ -0.19
RAB5CP51148 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.83□□□□□ -0.19
RAB5CP51148 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB5CP51148 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
RAB5CP51148 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB5CP51148 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB5CP51148 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.83□□□□□ -0.19
RAB5CP51148 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB5CP51148 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 LINC00167-201ENST00000530583 1419 ntBASIC13.83□□□□□ -0.2
RAB5CP51148 AC144831.1-201ENST00000573312 2656 ntBASIC13.83□□□□□ -0.2
RAB5CP51148 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB5CP51148 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
RAB5CP51148 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB5CP51148 KRT16P5-201ENST00000455284 522 ntBASIC13.83□□□□□ -0.2
RAB5CP51148 AC097658.1-201ENST00000475555 843 ntBASIC13.83□□□□□ -0.2
RAB5CP51148 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RAB5CP51148 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB5CP51148 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB5CP51148 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 AL009178.2-201ENST00000597278 2719 ntBASIC13.83□□□□□ -0.2
RAB5CP51148 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5CP51148 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5CP51148 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB5CP51148 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB5CP51148 AC104581.4-201ENST00000623126 3052 ntBASIC13.82□□□□□ -0.2
RAB5CP51148 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5CP51148 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB5CP51148 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB5CP51148 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RAB5CP51148 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms