Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFC5P40937 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.88■□□□□ 0.61
RFC5P40937 MCCD1P2-201ENST00000423228 335 ntBASIC18.88■□□□□ 0.61
RFC5P40937 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 REXO1L3P-201ENST00000622202 1288 ntBASIC18.88■□□□□ 0.61
RFC5P40937 AC092865.6-201ENST00000642101 219 ntBASIC18.88■□□□□ 0.61
RFC5P40937 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 BCAR1-209ENST00000546196 1340 ntBASIC18.88■□□□□ 0.61
RFC5P40937 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC5P40937 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC5P40937 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC5P40937 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC5P40937 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC5P40937 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RFC5P40937 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFC5P40937 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.87■□□□□ 0.61
RFC5P40937 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC5P40937 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RFC5P40937 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC5P40937 KRT19P2-202ENST00000557173 1012 ntBASIC18.87■□□□□ 0.61
RFC5P40937 PDPK2P-202ENST00000562415 1191 ntBASIC18.87■□□□□ 0.61
RFC5P40937 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC5P40937 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.87■□□□□ 0.61
RFC5P40937 AL513190.1-201ENST00000621254 727 ntBASIC18.87■□□□□ 0.61
RFC5P40937 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC5P40937 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC5P40937 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 LINC02012-201ENST00000608206 1725 ntBASIC18.86■□□□□ 0.61
RFC5P40937 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC5P40937 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
RFC5P40937 FRMD8P1-201ENST00000440433 1524 ntBASIC18.86■□□□□ 0.61
RFC5P40937 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC5P40937 UPF3AP3-201ENST00000420996 769 ntBASIC18.86■□□□□ 0.61
RFC5P40937 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC5P40937 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC5P40937 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC5P40937 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
RFC5P40937 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC5P40937 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC5P40937 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC5P40937 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFC5P40937 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RFC5P40937 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RFC5P40937 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC5P40937 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RFC5P40937 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC5P40937 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RFC5P40937 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFC5P40937 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC5P40937 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC5P40937 AC025580.3-201ENST00000617932 1424 ntBASIC18.85■□□□□ 0.61
RFC5P40937 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFC5P40937 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC5P40937 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms