Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.56■□□□□ 0.72
CLCN1P35523 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 AC010203.1-204ENST00000548782 407 ntBASIC19.56■□□□□ 0.72
CLCN1P35523 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 AC073912.3-201ENST00000624414 853 ntBASIC19.56■□□□□ 0.72
CLCN1P35523 AC133561.5-201ENST00000635547 218 ntBASIC19.56■□□□□ 0.72
CLCN1P35523 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLCN1P35523 AC097493.4-201ENST00000641197 219 ntBASIC19.56■□□□□ 0.72
CLCN1P35523 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLCN1P35523 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN1P35523 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN1P35523 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.55■□□□□ 0.72
CLCN1P35523 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLCN1P35523 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLCN1P35523 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.55■□□□□ 0.72
CLCN1P35523 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CLCN1P35523 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLCN1P35523 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLCN1P35523 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN1P35523 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN1P35523 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLCN1P35523 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 AC009065.1-201ENST00000564055 1225 ntBASIC19.54■□□□□ 0.72
CLCN1P35523 MIR3917-201ENST00000580971 93 ntBASIC19.54■□□□□ 0.72
CLCN1P35523 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CLCN1P35523 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CLCN1P35523 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLCN1P35523 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCN1P35523 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCN1P35523 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN1P35523 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms