Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNA3P32297 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNA3P32297 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.12■□□□□ 0.49
CHRNA3P32297 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.12■□□□□ 0.49
CHRNA3P32297 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 AC009533.2-201ENST00000543664 586 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 MIR5100-201ENST00000579544 119 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 AL138831.2-201ENST00000606564 490 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 AC114341.1-201ENST00000618070 349 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 AC097374.2-201ENST00000618617 1306 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 TP73-AS1-210ENST00000637775 1455 ntBASIC18.12■□□□□ 0.49
CHRNA3P32297 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA3P32297 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CHRNA3P32297 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA3P32297 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNA3P32297 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA3P32297 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA3P32297 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CHRNA3P32297 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNA3P32297 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 MYCLP1-201ENST00000372451 1075 ntBASIC18.11■□□□□ 0.49
CHRNA3P32297 COX5BP2-201ENST00000392354 334 ntBASIC18.11■□□□□ 0.49
CHRNA3P32297 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA3P32297 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.11■□□□□ 0.49
CHRNA3P32297 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNA3P32297 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA3P32297 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.11■□□□□ 0.49
CHRNA3P32297 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.11■□□□□ 0.49
CHRNA3P32297 AL591684.3-201ENST00000605187 298 ntBASIC18.11■□□□□ 0.49
CHRNA3P32297 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 AC125634.1-201ENST00000438758 1403 ntBASIC18.11■□□□□ 0.49
CHRNA3P32297 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA3P32297 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNA3P32297 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 AL603756.1-201ENST00000606511 2163 ntBASIC18.11■□□□□ 0.49
CHRNA3P32297 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA3P32297 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHRNA3P32297 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA3P32297 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA3P32297 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHRNA3P32297 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CHRNA3P32297 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.1■□□□□ 0.49
CHRNA3P32297 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA3P32297 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA3P32297 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNA3P32297 RCN1P2-201ENST00000398357 915 ntBASIC18.1■□□□□ 0.49
CHRNA3P32297 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHRNA3P32297 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHRNA3P32297 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNA3P32297 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms