Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 AC093214.1-201ENST00000511688 1107 ntBASIC19.5■□□□□ 0.71
CNGA1P29973 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.5■□□□□ 0.71
CNGA1P29973 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
CNGA1P29973 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
CNGA1P29973 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CNGA1P29973 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.5■□□□□ 0.71
CNGA1P29973 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNGA1P29973 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.5■□□□□ 0.71
CNGA1P29973 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 NOC2LP2-201ENST00000407594 1944 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 AC005332.8-201ENST00000622750 2735 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 AC012317.2-201ENST00000623305 2251 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 AC005237.2-201ENST00000434368 219 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.49■□□□□ 0.71
CNGA1P29973 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 AC002558.1-201ENST00000488906 803 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 DUX4L27-201ENST00000554796 1261 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.49■□□□□ 0.71
CNGA1P29973 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.49■□□□□ 0.71
CNGA1P29973 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CNGA1P29973 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.49■□□□□ 0.71
CNGA1P29973 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNGA1P29973 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.48■□□□□ 0.71
CNGA1P29973 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 ACTG1P4-201ENST00000425123 1122 ntBASIC19.48■□□□□ 0.71
CNGA1P29973 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.48■□□□□ 0.71
CNGA1P29973 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.48■□□□□ 0.71
CNGA1P29973 RNA5SP421-201ENST00000516864 134 ntBASIC19.48■□□□□ 0.71
CNGA1P29973 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.48■□□□□ 0.71
CNGA1P29973 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.48■□□□□ 0.71
CNGA1P29973 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
CNGA1P29973 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 Z92544.3-201ENST00000624747 417 ntBASIC19.48■□□□□ 0.71
CNGA1P29973 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.48■□□□□ 0.71
CNGA1P29973 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.48■□□□□ 0.71
CNGA1P29973 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNGA1P29973 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CNGA1P29973 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms