Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPA1P20036 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.33■□□□□ 0.37
HLA-DPA1P20036 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPA1P20036 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPA1P20036 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPA1P20036 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DPA1P20036 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 AC139887.3-201ENST00000568585 713 ntBASIC17.33■□□□□ 0.36
HLA-DPA1P20036 AC064862.7-201ENST00000604520 867 ntBASIC17.33■□□□□ 0.36
HLA-DPA1P20036 AL139424.1-201ENST00000607572 797 ntBASIC17.33■□□□□ 0.36
HLA-DPA1P20036 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 AC012313.1-201ENST00000593393 3059 ntBASIC17.33■□□□□ 0.36
HLA-DPA1P20036 AC060834.1-201ENST00000443027 2032 ntBASIC17.33■□□□□ 0.36
HLA-DPA1P20036 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPA1P20036 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC092053.1-201ENST00000605787 1936 ntBASIC17.32■□□□□ 0.36
HLA-DPA1P20036 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC021087.4-201ENST00000563761 564 ntBASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC080080.1-201ENST00000625121 2420 ntBASIC17.32■□□□□ 0.36
HLA-DPA1P20036 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DPA1P20036 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 EMBP1-201ENST00000458200 901 ntBASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms