Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.11■□□□□ 0.01
ATF1P18846 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.11■□□□□ 0.01
ATF1P18846 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.11■□□□□ 0.01
ATF1P18846 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 HYMAI-201ENST00000635591 3347 ntBASIC15.1■□□□□ 0.01
ATF1P18846 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.1■□□□□ 0.01
ATF1P18846 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ATF1P18846 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 AC124947.2-201ENST00000547118 1133 ntBASIC15.1■□□□□ 0.01
ATF1P18846 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.1■□□□□ 0.01
ATF1P18846 RNF126P1-202ENST00000569893 925 ntBASIC15.1■□□□□ 0.01
ATF1P18846 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ATF1P18846 AC006011.2-201ENST00000621313 1158 ntBASIC15.1■□□□□ 0.01
ATF1P18846 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.1■□□□□ 0.01
ATF1P18846 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.1■□□□□ 0.01
ATF1P18846 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ATF1P18846 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ATF1P18846 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.1■□□□□ 0.01
ATF1P18846 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATF1P18846 Z83836.1-201ENST00000624605 1642 ntBASIC15.1■□□□□ 0.01
ATF1P18846 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.1■□□□□ 0.01
ATF1P18846 AC092364.2-201ENST00000596710 2692 ntBASIC15.1■□□□□ 0.01
ATF1P18846 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.09■□□□□ 0.01
ATF1P18846 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.09■□□□□ 0.01
ATF1P18846 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.09■□□□□ 0.01
ATF1P18846 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.09■□□□□ 0.01
ATF1P18846 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ATF1P18846 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.09■□□□□ 0.01
ATF1P18846 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.09■□□□□ 0.01
ATF1P18846 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.09■□□□□ 0.01
ATF1P18846 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ATF1P18846 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.09■□□□□ 0.01
ATF1P18846 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.09■□□□□ 0.01
ATF1P18846 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.09■□□□□ 0.01
ATF1P18846 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ATF1P18846 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.09■□□□□ 0.01
ATF1P18846 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATF1P18846 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.09■□□□□ 0.01
ATF1P18846 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms