Protein–RNA interactions for Protein: P18564

ITGB6, Integrin beta-6, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6P18564 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.15■□□□□ 0.34
ITGB6P18564 MTDHP3-201ENST00000594186 672 ntBASIC17.15■□□□□ 0.34
ITGB6P18564 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ITGB6P18564 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ITGB6P18564 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ITGB6P18564 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ITGB6P18564 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.15■□□□□ 0.34
ITGB6P18564 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGB6P18564 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.14■□□□□ 0.34
ITGB6P18564 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ITGB6P18564 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.14■□□□□ 0.34
ITGB6P18564 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 AC016396.2-201ENST00000562575 1417 ntBASIC17.14■□□□□ 0.33
ITGB6P18564 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ITGB6P18564 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.14■□□□□ 0.33
ITGB6P18564 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.14■□□□□ 0.33
ITGB6P18564 AC106730.1-201ENST00000566722 1090 ntBASIC17.14■□□□□ 0.33
ITGB6P18564 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
ITGB6P18564 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.14■□□□□ 0.33
ITGB6P18564 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGB6P18564 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGB6P18564 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGB6P18564 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
ITGB6P18564 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.13■□□□□ 0.33
ITGB6P18564 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGB6P18564 SPDYE21P-201ENST00000413323 827 ntBASIC17.13■□□□□ 0.33
ITGB6P18564 AL031284.1-201ENST00000419297 478 ntBASIC17.13■□□□□ 0.33
ITGB6P18564 AL020989.1-201ENST00000422979 469 ntBASIC17.13■□□□□ 0.33
ITGB6P18564 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ITGB6P18564 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.13■□□□□ 0.33
ITGB6P18564 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.13■□□□□ 0.33
ITGB6P18564 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.13■□□□□ 0.33
ITGB6P18564 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.13■□□□□ 0.33
ITGB6P18564 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ITGB6P18564 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB6P18564 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms