Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CCL4P13236 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL4P13236 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.1■□□□□ 0.17
CCL4P13236 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 CNN2P2-201ENST00000443536 909 ntBASIC16.1■□□□□ 0.17
CCL4P13236 CNN2P3-201ENST00000450201 906 ntBASIC16.1■□□□□ 0.17
CCL4P13236 COX20P2-201ENST00000452636 358 ntBASIC16.1■□□□□ 0.17
CCL4P13236 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL4P13236 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CCL4P13236 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.1■□□□□ 0.17
CCL4P13236 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL4P13236 AL136317.3-201ENST00000618497 906 ntBASIC16.1■□□□□ 0.17
CCL4P13236 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL4P13236 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 UXT-AS1-201ENST00000590504 1525 ntBASIC16.09■□□□□ 0.17
CCL4P13236 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL4P13236 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL4P13236 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL4P13236 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL4P13236 IGHV3-62-201ENST00000520057 340 ntBASIC16.09■□□□□ 0.17
CCL4P13236 AC069262.1-201ENST00000539058 672 ntBASIC16.09■□□□□ 0.17
CCL4P13236 LINC01225-203ENST00000563550 1244 ntBASIC16.09■□□□□ 0.17
CCL4P13236 AC051619.7-201ENST00000568314 623 ntBASIC16.09■□□□□ 0.17
CCL4P13236 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL4P13236 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL4P13236 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCL4P13236 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL4P13236 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL4P13236 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CCL4P13236 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL4P13236 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.17
CCL4P13236 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL4P13236 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCL4P13236 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL4P13236 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CCL4P13236 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCL4P13236 AL512356.2-201ENST00000546955 174 ntBASIC16.08■□□□□ 0.16
CCL4P13236 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 AC138761.1-201ENST00000584393 385 ntBASIC16.08■□□□□ 0.16
CCL4P13236 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 AP001059.3-201ENST00000619053 235 ntBASIC16.08■□□□□ 0.16
CCL4P13236 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 TUBB3P1-201ENST00000405796 1332 ntBASIC16.08■□□□□ 0.16
CCL4P13236 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.08■□□□□ 0.16
CCL4P13236 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 AL353732.1-201ENST00000569618 1459 ntBASIC16.08■□□□□ 0.16
CCL4P13236 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms