Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.27■■□□□ 1.16
COL5A2P05997 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.27■■□□□ 1.16
COL5A2P05997 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.27■■□□□ 1.16
COL5A2P05997 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.27■■□□□ 1.16
COL5A2P05997 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COL5A2P05997 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.27■■□□□ 1.16
COL5A2P05997 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC22.27■■□□□ 1.16
COL5A2P05997 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL5A2P05997 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC22.27■■□□□ 1.16
COL5A2P05997 MIR4492-201ENST00000581627 80 ntBASIC22.27■■□□□ 1.16
COL5A2P05997 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COL5A2P05997 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
COL5A2P05997 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
COL5A2P05997 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
COL5A2P05997 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
COL5A2P05997 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 TNXA-203ENST00000507684 2038 ntBASIC22.26■■□□□ 1.15
COL5A2P05997 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
COL5A2P05997 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.26■■□□□ 1.15
COL5A2P05997 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
COL5A2P05997 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 ZNF890P-202ENST00000530367 1156 ntBASIC22.26■■□□□ 1.15
COL5A2P05997 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 AC104794.3-201ENST00000566840 1248 ntBASIC22.26■■□□□ 1.15
COL5A2P05997 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL5A2P05997 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
COL5A2P05997 CETN4P-206ENST00000642099 2168 ntBASIC22.26■■□□□ 1.15
COL5A2P05997 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
COL5A2P05997 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
COL5A2P05997 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC22.25■■□□□ 1.15
COL5A2P05997 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.25■■□□□ 1.15
COL5A2P05997 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
COL5A2P05997 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC22.25■■□□□ 1.15
COL5A2P05997 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC22.25■■□□□ 1.15
COL5A2P05997 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.25■■□□□ 1.15
COL5A2P05997 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.25■■□□□ 1.15
COL5A2P05997 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.25■■□□□ 1.15
COL5A2P05997 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC22.25■■□□□ 1.15
COL5A2P05997 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC22.25■■□□□ 1.15
COL5A2P05997 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL5A2P05997 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
COL5A2P05997 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.24■■□□□ 1.15
COL5A2P05997 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 AL353705.2-201ENST00000428243 662 ntBASIC22.24■■□□□ 1.15
COL5A2P05997 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.24■■□□□ 1.15
COL5A2P05997 KRT18P34-201ENST00000488218 1270 ntBASIC22.24■■□□□ 1.15
COL5A2P05997 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC22.24■■□□□ 1.15
COL5A2P05997 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC22.24■■□□□ 1.15
COL5A2P05997 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
COL5A2P05997 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC22.24■■□□□ 1.15
COL5A2P05997 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
COL5A2P05997 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL5A2P05997 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.24■■□□□ 1.15
COL5A2P05997 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL5A2P05997 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.24■■□□□ 1.15
COL5A2P05997 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.23■■□□□ 1.15
COL5A2P05997 AL355312.1-201ENST00000407115 2176 ntBASIC22.23■■□□□ 1.15
COL5A2P05997 BX323043.1-201ENST00000641006 1765 ntBASIC22.23■■□□□ 1.15
COL5A2P05997 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 AC133963.1-201ENST00000504166 1679 ntBASIC22.23■■□□□ 1.15
COL5A2P05997 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.23■■□□□ 1.15
COL5A2P05997 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms