Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP3BO95985 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP3BO95985 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.62■□□□□ 0.41
TOP3BO95985 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.62■□□□□ 0.41
TOP3BO95985 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 AL035633.1-201ENST00000406139 838 ntBASIC17.62■□□□□ 0.41
TOP3BO95985 AC007967.2-201ENST00000432613 625 ntBASIC17.62■□□□□ 0.41
TOP3BO95985 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP3BO95985 RFPL4AP1-201ENST00000530883 850 ntBASIC17.62■□□□□ 0.41
TOP3BO95985 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TOP3BO95985 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.62■□□□□ 0.41
TOP3BO95985 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TOP3BO95985 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP3BO95985 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TOP3BO95985 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP3BO95985 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.62■□□□□ 0.41
TOP3BO95985 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP3BO95985 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP3BO95985 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TOP3BO95985 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP3BO95985 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 AC092364.2-202ENST00000597012 1073 ntBASIC17.61■□□□□ 0.41
TOP3BO95985 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP3BO95985 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TOP3BO95985 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP3BO95985 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP3BO95985 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP3BO95985 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TOP3BO95985 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TOP3BO95985 FAM8A3P-201ENST00000427218 844 ntBASIC17.6■□□□□ 0.41
TOP3BO95985 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.6■□□□□ 0.41
TOP3BO95985 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.6■□□□□ 0.41
TOP3BO95985 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.6■□□□□ 0.41
TOP3BO95985 AC113404.2-201ENST00000507884 177 ntBASIC17.6■□□□□ 0.41
TOP3BO95985 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP3BO95985 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP3BO95985 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP3BO95985 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
TOP3BO95985 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TOP3BO95985 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 AGGF1P2-201ENST00000426656 2106 ntBASIC17.6■□□□□ 0.41
TOP3BO95985 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP3BO95985 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TOP3BO95985 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TOP3BO95985 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP3BO95985 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TOP3BO95985 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP3BO95985 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 AL121761.2-201ENST00000598007 1648 ntBASIC17.59■□□□□ 0.41
TOP3BO95985 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP3BO95985 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TOP3BO95985 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP3BO95985 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms