Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 AC116407.3-201ENST00000623905 1129 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 FLJ16779-201ENST00000612722 7638 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 AC012317.2-201ENST00000623305 2251 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CNOT4O95628 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CNOT4O95628 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT4O95628 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 AC097637.2-201ENST00000624096 1997 ntBASIC15.28■□□□□ 0.04
CNOT4O95628 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT4O95628 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNOT4O95628 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CNOT4O95628 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.28■□□□□ 0.04
CNOT4O95628 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT4O95628 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT4O95628 AC008894.3-201ENST00000624324 3103 ntBASIC15.28■□□□□ 0.04
CNOT4O95628 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CNOT4O95628 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT4O95628 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 AL355312.1-201ENST00000407115 2176 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CNOT4O95628 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CNOT4O95628 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 AC073621.1-201ENST00000392730 636 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT4O95628 IGHV3-22-201ENST00000520721 359 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.27■□□□□ 0.04
CNOT4O95628 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 AC145285.3-201ENST00000564603 959 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT4O95628 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT4O95628 AL356488.2-201ENST00000602755 427 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 AL353135.1-201ENST00000606729 504 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 AC005593.1-201ENST00000624894 515 ntBASIC15.27■□□□□ 0.04
CNOT4O95628 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CNOT4O95628 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CNOT4O95628 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT4O95628 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT4O95628 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT4O95628 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT4O95628 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNOT4O95628 AC016396.2-201ENST00000562575 1417 ntBASIC15.26■□□□□ 0.03
CNOT4O95628 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms