Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC109462.3-201ENST00000573934 613 ntBASIC17.25■□□□□ 0.35
GPC4O75487 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC4O75487 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC4O75487 AD001527.2-201ENST00000622994 785 ntBASIC17.25■□□□□ 0.35
GPC4O75487 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.25■□□□□ 0.35
GPC4O75487 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.25■□□□□ 0.35
GPC4O75487 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC4O75487 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC4O75487 AL353593.2-201ENST00000602529 1483 ntBASIC17.24■□□□□ 0.35
GPC4O75487 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 KRT8P10-201ENST00000450021 1447 ntBASIC17.24■□□□□ 0.35
GPC4O75487 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.24■□□□□ 0.35
GPC4O75487 FOSL1P1-201ENST00000511041 816 ntBASIC17.24■□□□□ 0.35
GPC4O75487 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.24■□□□□ 0.35
GPC4O75487 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
GPC4O75487 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.24■□□□□ 0.35
GPC4O75487 AC138894.3-201ENST00000603787 634 ntBASIC17.24■□□□□ 0.35
GPC4O75487 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.24■□□□□ 0.35
GPC4O75487 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.24■□□□□ 0.35
GPC4O75487 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC4O75487 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GPC4O75487 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC4O75487 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
GPC4O75487 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 NUS1P2-201ENST00000417358 873 ntBASIC17.23■□□□□ 0.35
GPC4O75487 TSPY19P-201ENST00000418461 509 ntBASIC17.23■□□□□ 0.35
GPC4O75487 TSPY18P-201ENST00000441642 509 ntBASIC17.23■□□□□ 0.35
GPC4O75487 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 KRT18P56-201ENST00000507275 550 ntBASIC17.23■□□□□ 0.35
GPC4O75487 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.23■□□□□ 0.35
GPC4O75487 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC4O75487 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.23■□□□□ 0.35
GPC4O75487 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.23■□□□□ 0.35
GPC4O75487 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.23■□□□□ 0.35
GPC4O75487 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
GPC4O75487 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GPC4O75487 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.23■□□□□ 0.35
GPC4O75487 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC4O75487 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC4O75487 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC4O75487 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC4O75487 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC4O75487 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms