Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 AL590627.1-203ENST00000421194 1026 ntBASIC16.72■□□□□ 0.27
CNOT3O75175 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.72■□□□□ 0.27
CNOT3O75175 AF186996.4-201ENST00000467186 377 ntBASIC16.72■□□□□ 0.27
CNOT3O75175 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.72■□□□□ 0.27
CNOT3O75175 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT3O75175 AC064862.7-201ENST00000604520 867 ntBASIC16.72■□□□□ 0.27
CNOT3O75175 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT3O75175 AC120114.3-201ENST00000611923 658 ntBASIC16.72■□□□□ 0.27
CNOT3O75175 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 BX640515.1-201ENST00000617215 977 ntBASIC16.72■□□□□ 0.27
CNOT3O75175 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.72■□□□□ 0.27
CNOT3O75175 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 AC243591.1-201ENST00000452967 1364 ntBASIC16.72■□□□□ 0.27
CNOT3O75175 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.72■□□□□ 0.27
CNOT3O75175 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT3O75175 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.71■□□□□ 0.27
CNOT3O75175 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.71■□□□□ 0.27
CNOT3O75175 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.71■□□□□ 0.27
CNOT3O75175 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
CNOT3O75175 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.71■□□□□ 0.27
CNOT3O75175 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CNOT3O75175 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT3O75175 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT3O75175 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 FAM220CP-201ENST00000395253 831 ntBASIC16.71■□□□□ 0.27
CNOT3O75175 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.71■□□□□ 0.27
CNOT3O75175 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.71■□□□□ 0.27
CNOT3O75175 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT3O75175 AC021087.4-201ENST00000563761 564 ntBASIC16.71■□□□□ 0.27
CNOT3O75175 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT3O75175 AL671883.3-201ENST00000603274 991 ntBASIC16.71■□□□□ 0.27
CNOT3O75175 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.71■□□□□ 0.27
CNOT3O75175 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.71■□□□□ 0.27
CNOT3O75175 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT3O75175 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT3O75175 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNOT3O75175 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.71■□□□□ 0.26
CNOT3O75175 IL9RP2-201ENST00000423948 1312 ntBASIC16.7■□□□□ 0.26
CNOT3O75175 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CNOT3O75175 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 AC108860.2-201ENST00000562760 2183 ntBASIC16.7■□□□□ 0.26
CNOT3O75175 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CNOT3O75175 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 SLC25A1P1-201ENST00000528351 927 ntBASIC16.7■□□□□ 0.26
CNOT3O75175 FAM215A-202ENST00000632077 792 ntBASIC16.7■□□□□ 0.26
CNOT3O75175 AP000867.4-201ENST00000641616 219 ntBASIC16.7■□□□□ 0.26
CNOT3O75175 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms