Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.34
LDB2O43679 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LDB2O43679 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LDB2O43679 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB2O43679 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB2O43679 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB2O43679 LAGE3P1-201ENST00000425356 484 ntBASIC17.14■□□□□ 0.33
LDB2O43679 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB2O43679 AC079781.3-201ENST00000449110 356 ntBASIC17.14■□□□□ 0.33
LDB2O43679 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB2O43679 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB2O43679 RNPS1P1-201ENST00000507437 918 ntBASIC17.14■□□□□ 0.33
LDB2O43679 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB2O43679 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB2O43679 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB2O43679 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB2O43679 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LDB2O43679 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
LDB2O43679 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB2O43679 AC243591.1-201ENST00000452967 1364 ntBASIC17.14■□□□□ 0.33
LDB2O43679 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
LDB2O43679 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.13■□□□□ 0.33
LDB2O43679 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LDB2O43679 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.13■□□□□ 0.33
LDB2O43679 RPS2P1-201ENST00000434010 821 ntBASIC17.13■□□□□ 0.33
LDB2O43679 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.13■□□□□ 0.33
LDB2O43679 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.13■□□□□ 0.33
LDB2O43679 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.13■□□□□ 0.33
LDB2O43679 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.13■□□□□ 0.33
LDB2O43679 TERC-201ENST00000602385 541 ntBASIC17.13■□□□□ 0.33
LDB2O43679 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.13■□□□□ 0.33
LDB2O43679 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.13■□□□□ 0.33
LDB2O43679 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
LDB2O43679 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.13■□□□□ 0.33
LDB2O43679 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
LDB2O43679 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB2O43679 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB2O43679 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB2O43679 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB2O43679 AC006504.4-201ENST00000592118 1568 ntBASIC17.12■□□□□ 0.33
LDB2O43679 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LDB2O43679 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LDB2O43679 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LDB2O43679 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB2O43679 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LDB2O43679 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.12■□□□□ 0.33
LDB2O43679 HNRNPDP1-201ENST00000439535 754 ntBASIC17.12■□□□□ 0.33
LDB2O43679 FAM197Y8-203ENST00000450145 560 ntBASIC17.12■□□□□ 0.33
LDB2O43679 AC018712.1-201ENST00000455767 687 ntBASIC17.12■□□□□ 0.33
LDB2O43679 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB2O43679 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB2O43679 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.12■□□□□ 0.33
LDB2O43679 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
LDB2O43679 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB2O43679 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.12■□□□□ 0.33
LDB2O43679 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
LDB2O43679 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms