Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1AO00322 AC092068.3-201ENST00000587894 2016 ntBASIC16.29■□□□□ 0.2
UPK1AO00322 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1AO00322 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.29■□□□□ 0.2
UPK1AO00322 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.29■□□□□ 0.2
UPK1AO00322 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1AO00322 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.29■□□□□ 0.2
UPK1AO00322 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UPK1AO00322 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UPK1AO00322 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1AO00322 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UPK1AO00322 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1AO00322 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
UPK1AO00322 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UPK1AO00322 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.28■□□□□ 0.2
UPK1AO00322 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
UPK1AO00322 NUS1P2-201ENST00000417358 873 ntBASIC16.28■□□□□ 0.2
UPK1AO00322 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.28■□□□□ 0.2
UPK1AO00322 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.28■□□□□ 0.2
UPK1AO00322 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 STK19B-204ENST00000512515 211 ntBASIC16.28■□□□□ 0.2
UPK1AO00322 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.28■□□□□ 0.2
UPK1AO00322 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.28■□□□□ 0.2
UPK1AO00322 MIR5100-201ENST00000579544 119 ntBASIC16.28■□□□□ 0.2
UPK1AO00322 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.28■□□□□ 0.2
UPK1AO00322 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.28■□□□□ 0.2
UPK1AO00322 AC073592.5-201ENST00000624854 528 ntBASIC16.28■□□□□ 0.2
UPK1AO00322 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 PMPCAP1-201ENST00000508114 1576 ntBASIC16.28■□□□□ 0.2
UPK1AO00322 AC009336.1-201ENST00000608941 1553 ntBASIC16.28■□□□□ 0.2
UPK1AO00322 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
UPK1AO00322 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UPK1AO00322 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
UPK1AO00322 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UPK1AO00322 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1AO00322 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UPK1AO00322 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK1AO00322 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK1AO00322 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK1AO00322 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK1AO00322 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms