Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TBC1D3FA6NER0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 AC092902.6-201ENST00000641783 218 ntBASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.04■□□□□ 0.32
TBC1D3FA6NER0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 AC092919.2-201ENST00000623631 1645 ntBASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms