Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 NOC2LP2-201ENST00000407594 1944 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AL139400.1-201ENST00000366220 510 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 TFAMP1-201ENST00000412727 736 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 HLA-J-203ENST00000494367 1087 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 KRT8P48-201ENST00000515599 1220 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AC087641.1-201ENST00000557561 1021 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 MIR3909-201ENST00000579518 119 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AP001350.2-201ENST00000625104 1094 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 SLC22A20-204ENST00000530038 1673 ntBASIC14.97□□□□□ -0.01
MBD3L3A6NE82 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 AL627223.1-201ENST00000416693 442 ntBASIC14.97□□□□□ -0.01
MBD3L3A6NE82 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 AL135744.1-201ENST00000565098 629 ntBASIC14.97□□□□□ -0.01
MBD3L3A6NE82 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.97□□□□□ -0.01
MBD3L3A6NE82 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 AC009093.7-201ENST00000623853 1223 ntBASIC14.97□□□□□ -0.01
MBD3L3A6NE82 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 KRT8P49-201ENST00000604166 1432 ntBASIC14.97□□□□□ -0.01
MBD3L3A6NE82 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MBD3L3A6NE82 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 RNU1-129P-201ENST00000384064 167 ntBASIC14.96□□□□□ -0.01
MBD3L3A6NE82 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 AC092474.2-201ENST00000424288 719 ntBASIC14.96□□□□□ -0.01
MBD3L3A6NE82 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MBD3L3A6NE82 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms