Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC091812.2-201ENST00000619081 385 ntBASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 AC079781.4-201ENST00000641908 219 ntBASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 AL645728.2-201ENST00000641974 660 ntBASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 LINC02012-201ENST00000608206 1725 ntBASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM28A0A1B0GU29 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 AC141586.5-201ENST00000624546 2050 ntBASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 DNAJB3-202ENST00000449667 1266 ntBASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 CEND1P1-201ENST00000451006 455 ntBASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 AC092902.6-201ENST00000641783 218 ntBASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.31■□□□□ 0.52
SMIM28A0A1B0GU29 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 TOP3BP1-201ENST00000420768 1380 ntBASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM28A0A1B0GU29 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 ACTG1P14-201ENST00000446382 1122 ntBASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM28A0A1B0GU29 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms