Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 AC092364.2-201ENST00000596710 2692 ntBASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 HYMAI-201ENST00000635591 3347 ntBASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 KRT18P22-201ENST00000402024 1347 ntBASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 FAM8A6P-201ENST00000407496 1135 ntBASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 AP006294.2-201ENST00000641667 209 ntBASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV5A0A0B4J249 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 IGHV3-52-201ENST00000519770 353 ntBASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 AC019129.2-201ENST00000609837 1235 ntBASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 AL356309.3-201ENST00000624132 1934 ntBASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms