Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 KRT8P47-201ENST00000604727 1398 ntBASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 AL121761.2-201ENST00000598007 1648 ntBASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 RNA5SP416-201ENST00000516838 111 ntBASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 MIR1199-201ENST00000621445 119 ntBASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA6Q9Y5G7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA6Q9Y5G7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 AC009947.1-201ENST00000444350 727 ntBASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 DNAJB3-201ENST00000446806 729 ntBASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 PKD1P1-201ENST00000458669 6805 ntBASIC16.58■□□□□ 0.24
PCDHGA6Q9Y5G7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AC073621.1-201ENST00000392730 636 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms