Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 AC007688.1-201ENST00000475592 759 ntBASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 AP001542.1-201ENST00000591314 200 ntBASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 AC064862.7-201ENST00000604520 867 ntBASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB13Q9Y5F0 LINC02012-201ENST00000608206 1725 ntBASIC19.02■□□□□ 0.63
PCDHB13Q9Y5F0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB13Q9Y5F0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB13Q9Y5F0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB13Q9Y5F0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
PCDHB13Q9Y5F0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 AC021087.4-201ENST00000563761 564 ntBASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 EGFEM1P-202ENST00000431685 1563 ntBASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB13Q9Y5F0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 AC139887.3-201ENST00000568585 713 ntBASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB13Q9Y5F0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms