Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 TSEN15P1-201ENST00000423257 515 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE11-202ENST00000450699 704 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AC023141.5-201ENST00000458585 616 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE9P-201ENST00000570642 692 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE10P-202ENST00000612005 668 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE8P-202ENST00000612377 668 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AC009093.7-201ENST00000623853 1223 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AC084121.4-201ENST00000641598 221 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AF228730.8-201ENST00000642140 221 ntBASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPO2Q9UMS6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 KRT8P48-201ENST00000515599 1220 ntBASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AC243562.1-201ENST00000560672 389 ntBASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AL135744.1-201ENST00000565098 629 ntBASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AC013467.2-201ENST00000605472 835 ntBASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AC108860.2-201ENST00000562760 2183 ntBASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 LINC00896-202ENST00000609602 2128 ntBASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPO2Q9UMS6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 WASH6P-202ENST00000359512 1437 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 AL627223.1-201ENST00000416693 442 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 AC079140.1-201ENST00000508039 487 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 RFPL4AP1-201ENST00000530883 850 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 KRT8P23-201ENST00000560090 1207 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 AC015911.4-201ENST00000588022 1070 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 CYP2A7P1-201ENST00000595391 815 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 AC021097.1-201ENST00000607902 574 ntBASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 AC067852.2-201ENST00000590513 2313 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms