Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC107918.2-201ENST00000530817 355 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 ACTL9-202ENST00000612068 1252 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 REXO1L3P-201ENST00000622202 1288 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 AC004877.2-201ENST00000623941 599 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 AC092865.6-201ENST00000642101 219 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.09■□□□□ 0.49
CDH9Q9ULB4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 BCAR1-209ENST00000546196 1340 ntBASIC18.09■□□□□ 0.49
CDH9Q9ULB4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 DNAJB3-201ENST00000446806 729 ntBASIC18.09■□□□□ 0.49
CDH9Q9ULB4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 AC023141.13-201ENST00000604991 943 ntBASIC18.09■□□□□ 0.49
CDH9Q9ULB4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH9Q9ULB4 AL023806.1-201ENST00000603994 1649 ntBASIC18.09■□□□□ 0.49
CDH9Q9ULB4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH9Q9ULB4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH9Q9ULB4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH9Q9ULB4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH9Q9ULB4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CDH9Q9ULB4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.08■□□□□ 0.49
CDH9Q9ULB4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 MTDHP5-201ENST00000598980 586 ntBASIC18.08■□□□□ 0.48
CDH9Q9ULB4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 AL513190.1-201ENST00000621254 727 ntBASIC18.08■□□□□ 0.48
CDH9Q9ULB4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 AC141586.5-201ENST00000624546 2050 ntBASIC18.08■□□□□ 0.48
CDH9Q9ULB4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH9Q9ULB4 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.08■□□□□ 0.48
CDH9Q9ULB4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 MCCD1P2-201ENST00000423228 335 ntBASIC18.07■□□□□ 0.48
CDH9Q9ULB4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 KRT19P2-202ENST00000557173 1012 ntBASIC18.07■□□□□ 0.48
CDH9Q9ULB4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.07■□□□□ 0.48
CDH9Q9ULB4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms