Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
SLC52A1Q9NWF4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SLC52A1Q9NWF4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SLC52A1Q9NWF4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SLC52A1Q9NWF4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 LINC00895-201ENST00000629028 1637 ntBASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 AC021097.1-201ENST00000607902 574 ntBASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 AL138828.2-201ENST00000615812 383 ntBASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 BICD1-207ENST00000551848 1962 ntBASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC52A1Q9NWF4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 OR8S1-201ENST00000310194 1080 ntBASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC52A1Q9NWF4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 MIR4492-201ENST00000581627 80 ntBASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 AL355312.1-201ENST00000407115 2176 ntBASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC52A1Q9NWF4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 SLC25A1P3-201ENST00000395415 828 ntBASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 AC009477.1-201ENST00000452936 217 ntBASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 RN7SL692P-201ENST00000464677 288 ntBASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC52A1Q9NWF4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms