Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 NUS1P1-201ENST00000446295 882 ntBASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AC011498.5-201ENST00000592027 486 ntBASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 IGHV3-41-201ENST00000613121 348 ntBASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 AC073592.5-201ENST00000624854 528 ntBASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 KLF4P1-201ENST00000412782 1185 ntBASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 PMPCAP1-201ENST00000508114 1576 ntBASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC52A3Q9NQ40 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 AC148477.5-201ENST00000625164 1645 ntBASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 AL671277.2-201ENST00000458060 996 ntBASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms