Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 AL121772.3-201ENST00000610840 674 ntBASIC16.43■□□□□ 0.22
BRF2Q9HAW0 AL139288.1-201ENST00000623748 933 ntBASIC16.43■□□□□ 0.22
BRF2Q9HAW0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 AC084018.2-201ENST00000613093 2607 ntBASIC16.43■□□□□ 0.22
BRF2Q9HAW0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRF2Q9HAW0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 HCG4P8-203ENST00000443049 980 ntBASIC16.42■□□□□ 0.22
BRF2Q9HAW0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 AL022326.1-202ENST00000641533 845 ntBASIC16.42■□□□□ 0.22
BRF2Q9HAW0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRF2Q9HAW0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 AP002414.1-201ENST00000391405 1147 ntBASIC16.41■□□□□ 0.22
BRF2Q9HAW0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 NCF1C-201ENST00000438382 1427 ntBASIC16.41■□□□□ 0.22
BRF2Q9HAW0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRF2Q9HAW0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms