Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 AL117351.1-201ENST00000438864 766 ntBASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 AP002414.3-201ENST00000589352 1468 ntBASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SCAF1Q9H7N4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 LINC01126-201ENST00000623515 1646 ntBASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 YBX1P5-201ENST00000509441 847 ntBASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 AC008735.5-201ENST00000623544 497 ntBASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF1Q9H7N4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 RN7SL121P-201ENST00000584223 273 ntBASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 AL109620.1-201ENST00000618738 1197 ntBASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF1Q9H7N4 AC063926.2-201ENST00000623766 1308 ntBASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 TP73-AS1-210ENST00000637775 1455 ntBASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 AC190387.1-201ENST00000551683 408 ntBASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 AC092953.2-201ENST00000608000 699 ntBASIC25.7■■□□□ 1.71
SCAF1Q9H7N4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms