Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 AC012615.1-201ENST00000565797 1299 ntBASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 AC092329.2-201ENST00000598402 547 ntBASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 AC080080.1-201ENST00000625121 2420 ntBASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 POM121L3P-201ENST00000419331 1163 ntBASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 BNIP3P18-201ENST00000593976 575 ntBASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 AC093458.2-201ENST00000623150 629 ntBASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC68Q9H2F9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 AC093525.9-201ENST00000624961 1746 ntBASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 AC046158.3-201ENST00000624947 2558 ntBASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC68Q9H2F9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms