Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 PCDHB17P-201ENST00000539533 2393 ntBASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 LAGE3P1-201ENST00000425356 484 ntBASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 TPM4P1-201ENST00000436100 807 ntBASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 RNF216P1-203ENST00000404404 2427 ntBASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCSER1Q9C0I3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 RN7SL510P-201ENST00000581311 263 ntBASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCSER1Q9C0I3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 FLJ38576-201ENST00000623820 2459 ntBASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 FAAHP1-202ENST00000446499 1238 ntBASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 TP73-AS1-207ENST00000624167 988 ntBASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
CCSER1Q9C0I3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.16■□□□□ 0.66
CCSER1Q9C0I3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms