Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 AC009533.2-201ENST00000543664 586 ntBASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHACTR1Q9C0D0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PHACTR1Q9C0D0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PHACTR1Q9C0D0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.46■□□□□ 0.38
PHACTR1Q9C0D0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AL513523.2-202ENST00000427283 2040 ntBASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AC132938.5-201ENST00000624980 1813 ntBASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AL645929.1-201ENST00000420084 975 ntBASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 AC006011.2-201ENST00000621313 1158 ntBASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PHACTR1Q9C0D0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 KLF4P1-201ENST00000412782 1185 ntBASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 HLA-J-202ENST00000469281 1241 ntBASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC011840.4-201ENST00000578471 627 ntBASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC011467.2-201ENST00000598425 242 ntBASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHACTR1Q9C0D0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms