Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 AL845331.1-201ENST00000424978 1190 ntBASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 AL592071.1-201ENST00000611956 408 ntBASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 GUSBP12-201ENST00000513727 720 ntBASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC124947.2-201ENST00000547118 1133 ntBASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC124864.1-201ENST00000623408 392 ntBASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC073912.3-201ENST00000624414 853 ntBASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDHD3Q9BSH5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.52□□□□□ -0.08
HDHD3Q9BSH5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms