Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.08□□□□□ -0.32
VGLL1Q99990 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
VGLL1Q99990 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.08□□□□□ -0.32
VGLL1Q99990 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
VGLL1Q99990 BX664615.1-201ENST00000443558 458 ntBASIC13.07□□□□□ -0.32
VGLL1Q99990 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.07□□□□□ -0.32
VGLL1Q99990 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.07□□□□□ -0.32
VGLL1Q99990 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.07□□□□□ -0.32
VGLL1Q99990 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.07□□□□□ -0.32
VGLL1Q99990 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.07□□□□□ -0.32
VGLL1Q99990 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.07□□□□□ -0.32
VGLL1Q99990 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.07□□□□□ -0.32
VGLL1Q99990 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
VGLL1Q99990 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 AC073912.3-201ENST00000624414 853 ntBASIC13.07□□□□□ -0.32
VGLL1Q99990 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 AC097374.2-201ENST00000618617 1306 ntBASIC13.07□□□□□ -0.32
VGLL1Q99990 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VGLL1Q99990 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VGLL1Q99990 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VGLL1Q99990 AC092068.3-201ENST00000587894 2016 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.06□□□□□ -0.32
VGLL1Q99990 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.06□□□□□ -0.32
VGLL1Q99990 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
VGLL1Q99990 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms