Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE1Q99829 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE1Q99829 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.19■□□□□ 0.34
CPNE1Q99829 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.19■□□□□ 0.34
CPNE1Q99829 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE1Q99829 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE1Q99829 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CPNE1Q99829 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPNE1Q99829 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPNE1Q99829 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CPNE1Q99829 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 AP002490.2-201ENST00000524791 560 ntBASIC17.18■□□□□ 0.34
CPNE1Q99829 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.18■□□□□ 0.34
CPNE1Q99829 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 Z69720.1-201ENST00000601483 472 ntBASIC17.18■□□□□ 0.34
CPNE1Q99829 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE1Q99829 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE1Q99829 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPNE1Q99829 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE1Q99829 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE1Q99829 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE1Q99829 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CPNE1Q99829 INTS4P1-201ENST00000438455 1935 ntBASIC17.17■□□□□ 0.34
CPNE1Q99829 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CPNE1Q99829 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE1Q99829 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPNE1Q99829 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
CPNE1Q99829 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE1Q99829 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.17■□□□□ 0.34
CPNE1Q99829 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.17■□□□□ 0.34
CPNE1Q99829 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.17■□□□□ 0.34
CPNE1Q99829 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CPNE1Q99829 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE1Q99829 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 TUBB8P12-201ENST00000308911 1335 ntBASIC17.17■□□□□ 0.34
CPNE1Q99829 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 TUBB7P-202ENST00000428444 1305 ntBASIC17.17■□□□□ 0.34
CPNE1Q99829 KRT18P1-202ENST00000452408 1331 ntBASIC17.17■□□□□ 0.34
CPNE1Q99829 TUBB8P7-204ENST00000567960 1332 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms