Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LYSTQ99698 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LYSTQ99698 RAB43P1-201ENST00000561790 589 ntBASIC11.76□□□□□ -0.53
LYSTQ99698 MIR4453-201ENST00000584019 89 ntBASIC11.76□□□□□ -0.53
LYSTQ99698 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.76□□□□□ -0.53
LYSTQ99698 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.76□□□□□ -0.53
LYSTQ99698 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC11.76□□□□□ -0.53
LYSTQ99698 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LYSTQ99698 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC11.76□□□□□ -0.53
LYSTQ99698 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 AC103564.2-201ENST00000432853 1299 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 AL355994.2-201ENST00000447882 704 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.75□□□□□ -0.53
LYSTQ99698 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.75□□□□□ -0.53
LYSTQ99698 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 DUTP2-201ENST00000519164 463 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 AC104794.3-201ENST00000566840 1248 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
LYSTQ99698 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 REXO1L6P-201ENST00000603433 1515 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.75□□□□□ -0.53
LYSTQ99698 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LYSTQ99698 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.75□□□□□ -0.53
LYSTQ99698 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.75□□□□□ -0.53
LYSTQ99698 AC008494.3-201ENST00000606615 944 ntBASIC11.75□□□□□ -0.53
LYSTQ99698 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LYSTQ99698 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
LYSTQ99698 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.74□□□□□ -0.53
LYSTQ99698 FAM8A2P-201ENST00000528813 1142 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.74□□□□□ -0.53
LYSTQ99698 AC109635.5-201ENST00000533593 962 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
LYSTQ99698 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.74□□□□□ -0.53
LYSTQ99698 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.74□□□□□ -0.53
LYSTQ99698 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.74□□□□□ -0.53
LYSTQ99698 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.74□□□□□ -0.53
LYSTQ99698 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 NEFHP1-201ENST00000412845 2629 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LYSTQ99698 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LYSTQ99698 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.74□□□□□ -0.53
LYSTQ99698 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 AL671277.1-201ENST00000429656 993 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 SPDYE18-201ENST00000510091 1050 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.74□□□□□ -0.53
LYSTQ99698 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.74□□□□□ -0.53
LYSTQ99698 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 AC003101.2-201ENST00000612557 442 ntBASIC11.74□□□□□ -0.53
LYSTQ99698 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.74□□□□□ -0.53
LYSTQ99698 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LYSTQ99698 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.74□□□□□ -0.53
LYSTQ99698 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC11.74□□□□□ -0.53
LYSTQ99698 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LYSTQ99698 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.73□□□□□ -0.53
LYSTQ99698 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC11.73□□□□□ -0.53
LYSTQ99698 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms