Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 FAM185BP-201ENST00000443595 716 ntBASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 KRT18P2-201ENST00000447938 1258 ntBASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AC092865.5-201ENST00000545435 363 ntBASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 MTDHP5-201ENST00000598980 586 ntBASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AC010507.1-201ENST00000633895 436 ntBASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 AC018470.1-201ENST00000624790 3129 ntBASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AC023141.13-201ENST00000604991 943 ntBASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP1Q96SZ6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 SLC25A1P3-201ENST00000395415 828 ntBASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 MIR3687-2-201ENST00000577708 61 ntBASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 MIR3687-1-201ENST00000614492 61 ntBASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP1Q96SZ6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 LINC00896-202ENST00000609602 2128 ntBASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP1Q96SZ6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 MCCD1P2-201ENST00000423228 335 ntBASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms