Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 MRPS18AP1-201ENST00000414458 589 ntBASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 CRB3P1-201ENST00000449338 276 ntBASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 MPDU1-223ENST00000582151 728 ntBASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 AC012317.2-201ENST00000623305 2251 ntBASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRAMP1Q96RY5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 AP005018.1-201ENST00000525475 301 ntBASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CRAMP1Q96RY5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 AC131009.4-201ENST00000624048 1740 ntBASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 AC004408.2-201ENST00000623613 2777 ntBASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 TSSK5P-201ENST00000423978 907 ntBASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 AC142381.1-201ENST00000426099 345 ntBASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 SERBP1P5-201ENST00000510079 1181 ntBASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 AL590560.3-201ENST00000623350 461 ntBASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRAMP1Q96RY5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms