Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SLC25A39P2-201ENST00000537614 270 ntBASIC22.44■■□□□ 1.18
NBPF4Q96M43 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NBPF4Q96M43 FO538757.1-201ENST00000623083 1397 ntBASIC22.44■■□□□ 1.18
NBPF4Q96M43 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NBPF4Q96M43 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.44■■□□□ 1.18
NBPF4Q96M43 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.44■■□□□ 1.18
NBPF4Q96M43 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NBPF4Q96M43 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NBPF4Q96M43 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 WASH6P-202ENST00000359512 1437 ntBASIC22.43■■□□□ 1.18
NBPF4Q96M43 TOP3BP1-201ENST00000420768 1380 ntBASIC22.43■■□□□ 1.18
NBPF4Q96M43 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NBPF4Q96M43 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 HCG4-201ENST00000418983 998 ntBASIC22.43■■□□□ 1.18
NBPF4Q96M43 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NBPF4Q96M43 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.43■■□□□ 1.18
NBPF4Q96M43 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NBPF4Q96M43 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.43■■□□□ 1.18
NBPF4Q96M43 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NBPF4Q96M43 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NBPF4Q96M43 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 GNAS-203ENST00000306120 1878 ntBASIC22.43■■□□□ 1.18
NBPF4Q96M43 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.43■■□□□ 1.18
NBPF4Q96M43 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
NBPF4Q96M43 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 INGX-202ENST00000489074 768 ntBASIC22.42■■□□□ 1.18
NBPF4Q96M43 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.42■■□□□ 1.18
NBPF4Q96M43 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.42■■□□□ 1.18
NBPF4Q96M43 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.42■■□□□ 1.18
NBPF4Q96M43 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NBPF4Q96M43 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 MIR346-201ENST00000362234 95 ntBASIC22.41■■□□□ 1.18
NBPF4Q96M43 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 PMS2P4-201ENST00000412466 1052 ntBASIC22.41■■□□□ 1.18
NBPF4Q96M43 TREML5P-201ENST00000421694 576 ntBASIC22.41■■□□□ 1.18
NBPF4Q96M43 AC107890.1-201ENST00000422478 521 ntBASIC22.41■■□□□ 1.18
NBPF4Q96M43 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 AL031055.1-201ENST00000606362 631 ntBASIC22.41■■□□□ 1.18
NBPF4Q96M43 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NBPF4Q96M43 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.41■■□□□ 1.18
NBPF4Q96M43 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms