Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 RPL14-203ENST00000416518 812 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AL024508.2-201ENST00000607749 1894 ntBASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AC135983.4-201ENST00000564116 1262 ntBASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 PSME2-217ENST00000615264 874 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 PSME2-218ENST00000630027 185 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 AL009183.1-201ENST00000603760 355 ntBASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE2Q8WXH0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 GUSBP5-202ENST00000510805 1989 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 CTSL-202ENST00000342020 933 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 AL353705.2-201ENST00000428243 662 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 KLF4P1-201ENST00000412782 1185 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 HADH-212ENST00000638621 741 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 EGFEM1P-202ENST00000431685 1563 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 AL096828.3-201ENST00000615354 462 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 AC005702.4-201ENST00000618393 416 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 MTX1P1-201ENST00000440904 838 ntBASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE2Q8WXH0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms