Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AC092171.3-201ENST00000610122 2651 ntBASIC18.36■□□□□ 0.53
LMO3Q8TAP4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 AC148477.8-201ENST00000624298 468 ntBASIC18.36■□□□□ 0.53
LMO3Q8TAP4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LMO3Q8TAP4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 FAM197Y8-203ENST00000450145 560 ntBASIC18.35■□□□□ 0.53
LMO3Q8TAP4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LMO3Q8TAP4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 AL450487.1-201ENST00000426799 995 ntBASIC18.34■□□□□ 0.53
LMO3Q8TAP4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.34■□□□□ 0.53
LMO3Q8TAP4 OR7E14P-202ENST00000530490 1290 ntBASIC18.34■□□□□ 0.53
LMO3Q8TAP4 AC012640.2-201ENST00000561606 901 ntBASIC18.34■□□□□ 0.53
LMO3Q8TAP4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms