Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RTL9Q8NET4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 RARRES2P8-201ENST00000566335 367 ntBASIC21.02■□□□□ 0.96
RTL9Q8NET4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 AL009183.1-201ENST00000603760 355 ntBASIC21.02■□□□□ 0.96
RTL9Q8NET4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RTL9Q8NET4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.02■□□□□ 0.96
RTL9Q8NET4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 AC093525.9-201ENST00000624961 1746 ntBASIC21.02■□□□□ 0.96
RTL9Q8NET4 SLC22A20-204ENST00000530038 1673 ntBASIC21.02■□□□□ 0.96
RTL9Q8NET4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.02■□□□□ 0.96
RTL9Q8NET4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.02■□□□□ 0.95
RTL9Q8NET4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 AC012569.1-201ENST00000591191 1524 ntBASIC21.01■□□□□ 0.95
RTL9Q8NET4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.01■□□□□ 0.95
RTL9Q8NET4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL9Q8NET4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTL9Q8NET4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTL9Q8NET4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21■□□□□ 0.95
RTL9Q8NET4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTL9Q8NET4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
RTL9Q8NET4 AC004449.1-201ENST00000564240 433 ntBASIC21■□□□□ 0.95
RTL9Q8NET4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21■□□□□ 0.95
RTL9Q8NET4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTL9Q8NET4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL9Q8NET4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21■□□□□ 0.95
RTL9Q8NET4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 AL671277.1-201ENST00000429656 993 ntBASIC20.99■□□□□ 0.95
RTL9Q8NET4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 TIMM8BP1-201ENST00000452384 211 ntBASIC20.99■□□□□ 0.95
RTL9Q8NET4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 AL135744.1-201ENST00000565098 629 ntBASIC20.99■□□□□ 0.95
RTL9Q8NET4 AC015911.4-201ENST00000588022 1070 ntBASIC20.99■□□□□ 0.95
RTL9Q8NET4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms