Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PSD4Q8NDX1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PSD4Q8NDX1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PSD4Q8NDX1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PSD4Q8NDX1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
PSD4Q8NDX1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AC096633.1-201ENST00000422446 749 ntBASIC16.29■□□□□ 0.2
PSD4Q8NDX1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AC106795.1-205ENST00000512851 1056 ntBASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AP001269.4-201ENST00000609611 512 ntBASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSD4Q8NDX1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 SLC25A6P4-201ENST00000586535 553 ntBASIC16.28■□□□□ 0.2
PSD4Q8NDX1 AL355877.3-201ENST00000622820 899 ntBASIC16.28■□□□□ 0.2
PSD4Q8NDX1 TP73-AS1-207ENST00000624167 988 ntBASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSD4Q8NDX1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSD4Q8NDX1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms