Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SLC22A20-204ENST00000530038 1673 ntBASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 IGHV3-71-201ENST00000523324 359 ntBASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CFAP43Q8NDM7 CU639417.3-201ENST00000624240 1404 ntBASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 PIN1P1-201ENST00000412108 996 ntBASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
CFAP43Q8NDM7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 AC134043.2-201ENST00000624206 2238 ntBASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 AC241585.1-201ENST00000433527 519 ntBASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 AC005412.3-201ENST00000580309 715 ntBASIC26.54■■□□□ 1.84
CFAP43Q8NDM7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 KRT8P23-201ENST00000560090 1207 ntBASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 AC100757.3-201ENST00000622361 1406 ntBASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
CFAP43Q8NDM7 AC093525.9-201ENST00000624961 1746 ntBASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 AC016396.2-201ENST00000562575 1417 ntBASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 ARSEP1-201ENST00000420443 635 ntBASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 MIR3909-201ENST00000579518 119 ntBASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 AL161645.1-201ENST00000622716 1255 ntBASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC26.52■■□□□ 1.84
CFAP43Q8NDM7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC26.51■■□□□ 1.84
CFAP43Q8NDM7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC26.51■■□□□ 1.83
CFAP43Q8NDM7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 LINC01225-203ENST00000563550 1244 ntBASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms