Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.83■□□□□ 0.12
C9orf40Q8IXQ3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf40Q8IXQ3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf40Q8IXQ3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf40Q8IXQ3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 MIR574-201ENST00000385209 96 ntBASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 AC007967.2-201ENST00000432613 625 ntBASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 AC002310.6-201ENST00000624451 1377 ntBASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
C9orf40Q8IXQ3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 VN2R19P-201ENST00000442399 1052 ntBASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 AC140113.2-201ENST00000604370 208 ntBASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf40Q8IXQ3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 AP001094.4-201ENST00000579008 2176 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 CRYGEP-201ENST00000412192 528 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 MED15P5-201ENST00000423150 992 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 PMS2P1-201ENST00000431037 1228 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 KRT18P58-201ENST00000527480 1120 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 AC124947.2-201ENST00000547118 1133 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 DUX4L17-201ENST00000557360 1267 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 AC064836.3-201ENST00000607928 673 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 AC027601.4-201ENST00000611259 610 ntBASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf40Q8IXQ3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms